CDS

Accession Number TCMCG057C03507
gbkey CDS
Protein Id XP_018432987.1
Location complement(join(22771133..22771172,22771259..22771335,22771404..22771470,22771780..22771825,22771949..22772104,22772168..22772288,22772373..22772521,22772599..22772660,22772743..22773023))
Gene LOC108805431
GeneID 108805431
Organism Raphanus sativus

Protein

Length 332aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577485.1
Definition PREDICTED: biotin--protein ligase 1, chloroplastic isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category H
Description ligase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01074        [VIEW IN KEGG]
R05145        [VIEW IN KEGG]
KEGG_rclass RC00043        [VIEW IN KEGG]
RC00070        [VIEW IN KEGG]
RC00096        [VIEW IN KEGG]
RC02896        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01942        [VIEW IN KEGG]
EC 6.3.4.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.3.4.11        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.3.4.15        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.3.4.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00780        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00780        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004077        [VIEW IN EMBL-EBI]
GO:0004078        [VIEW IN EMBL-EBI]
GO:0004080        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005652        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007584        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009305        [VIEW IN EMBL-EBI]
GO:0009374        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016879        [VIEW IN EMBL-EBI]
GO:0018271        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019842        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0031406        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0033273        [VIEW IN EMBL-EBI]
GO:0033293        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0042966        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043177        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070781        [VIEW IN EMBL-EBI]
GO:0071110        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901681        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGGTGATGATTCGTGTAGCTTGGTTTTGTGTGGGAAGTCCTCTGTTGAGAATGATACAGCAAAGCGTTTGAAGAACGAGAACTTGCTTAAGCTCCCAGATGATACTTCTAAAGTTTCACTCTTTTTAGCTTCCGAGATCAAGAATTTGGTTAGAGATTATGATGATGATGATTCATTCAATCTTCCACTCTTCATGAACTCGCTTTCAACTTCTCGGTTCGGTCGGTTTCTCATTTGGTCTCCCCGCTTGTCTTCCACTCACGATCTTGTTTCTCATAACTTTTCTGAGCTTCCGGTTGGTTCAGTTTGCGTCTCAGATATTCAGTTTAAGGGTAGAGGCAGAACAAAGAATATCTGGGAATCTCCAAAGGGTTGTCTTATGTATTCTTTTACGGTAGAAATGGAAGATGGTCGAATCGTGCCTTTGATTCAATATGTTGTATCTCTCGCTGTTACTGAGGCAGTCAAAGATGTTTGTGACAACAAGGGTTTGCCGTATATAGATGTTAAAATAAAGTGGCCCAATGATCTTTACTTGAATGACCTGAAAGTCGGAGGCATTTTGTGTACCTCTACCTACAGATCAAGAAAATTTCACGTTAGTGTTGGTGTGGGATTGAATGTGGACAATGATCAACCGACCACATGCTTAAACGCTGTACTAAAAGACATATCTCCTGCATCAATTCTACTTAAAAGAGAAGAAATTATTGCTGCCTTCTTTCATAAATTCGAGAAATTCTTTGATCTGTTCATTGACCAAGGTTTTAAATCTCTCGAGGAGCTTTACTACAGGACATGGCTTCACGGCGGGCAAAGAGTGATCGTTGAAGATAAAATCGAGGACCAAGTTGTTCAAAACATTGTGACTATCCAGGGTTTGACATCTTCTGGATATCTGATGGCTATTGGAGATGATTATCAAATGTATGAGCTTCACCCTGATGGCAATAGTTTTGACTTTTTCAAAGGTCTAGTCCGAAGAAAAATATGA
Protein:  
MDGDDSCSLVLCGKSSVENDTAKRLKNENLLKLPDDTSKVSLFLASEIKNLVRDYDDDDSFNLPLFMNSLSTSRFGRFLIWSPRLSSTHDLVSHNFSELPVGSVCVSDIQFKGRGRTKNIWESPKGCLMYSFTVEMEDGRIVPLIQYVVSLAVTEAVKDVCDNKGLPYIDVKIKWPNDLYLNDLKVGGILCTSTYRSRKFHVSVGVGLNVDNDQPTTCLNAVLKDISPASILLKREEIIAAFFHKFEKFFDLFIDQGFKSLEELYYRTWLHGGQRVIVEDKIEDQVVQNIVTIQGLTSSGYLMAIGDDYQMYELHPDGNSFDFFKGLVRRKI